Well I decided to do it but I'm still working out a few flaws in design with the help of many. I'm including pictures of it as its present state to do a before after plus so others can help me with design problems. 
Here it is..
Full view
Area of action?
How much width we are talking
The cage
Slightly angled view of case
How much space between base and floor
I have had some ideas given to me from PV, XMS and Marcus. Here are some sketches from Marcus which seem pretty good.
First and second idea
Foiled by the fan and fan filter. The L bracket wouldnt have fit
So he came up with
Slightly forward from the fan whilst putting the hdds in my two 3.25" cage.
Might need to impliment some kind of cooling for these dependin on how hot they will get. (2x Seagate 320gb)
What are the chances of removing the hdd cage lowering the case's structural strength with potential twisting etc. during lan transport?
I should be using these components:
1/2" Clear High Flex Hose (XSPC)
12V Laing DDC-1T Pro w/OCLabs XP Top Blue/UV Blue
Black Ice GT Stealth II
D-TEK FuZion CPU Block (gettin 2nd hand good condition off some guy
Zinc Plated Jubilee Wormdrive Clip 1/2" (10 Pack)
Feser One Coolant 1Ltr (UV Acid Green)
Danger Den Delrin/Acetal T Fitting
Danger Den Fillport (Delrin)
Take a read and give feedback. Thanks!

Here it is..
Full view
Area of action?
How much width we are talking
The cage
Slightly angled view of case
How much space between base and floor
I have had some ideas given to me from PV, XMS and Marcus. Here are some sketches from Marcus which seem pretty good.
First and second idea
Foiled by the fan and fan filter. The L bracket wouldnt have fit
So he came up with
Slightly forward from the fan whilst putting the hdds in my two 3.25" cage.
Might need to impliment some kind of cooling for these dependin on how hot they will get. (2x Seagate 320gb)
What are the chances of removing the hdd cage lowering the case's structural strength with potential twisting etc. during lan transport?
I should be using these components:
1/2" Clear High Flex Hose (XSPC)
12V Laing DDC-1T Pro w/OCLabs XP Top Blue/UV Blue
Black Ice GT Stealth II
D-TEK FuZion CPU Block (gettin 2nd hand good condition off some guy
Zinc Plated Jubilee Wormdrive Clip 1/2" (10 Pack)
Feser One Coolant 1Ltr (UV Acid Green)
Danger Den Delrin/Acetal T Fitting
Danger Den Fillport (Delrin)
Take a read and give feedback. Thanks!